Lipid Modification Database
Tag Content
LipidDB ID
LipidDB-9606-01404
Entry Name
UniProt Accession
Theoretical PI
5.7
Molecular Weight
24841.31
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Ras-related protein Rab-28
Protein Synonyms/Alias
Gene Name
RAB28
Gene Synonyms/Alias
Created Date
01-OCT-1996
 Lipid Modification Sites 
 Position   Sequence Form   Peptide   References   Modification Type 
218
Canonical
NPPRSSMCAVQ****
[1]
S-Farnesylation
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Reference
[1] Maurer-Stroh S, Koranda M, Benetka W, Schneider G, Sirota FL, Eisenhaber F.Towards complete sets of farnesylated and geranylgeranylated proteins. PLoSComput Biol. 2007 Apr 6;3(4):e66. Epub 2007 Feb 23.[PMID:17411337]
Functional Description
Sequence Annotation
Nucleotide-binding: 19 27 GTP.
Nucleotide-binding: 68 72 GTP.
Nucleotide-binding: 129 132 GTP.
Nucleotide-binding: 159 161 GTP.
Motif: 41 49 Effector region.
Modified residue: 2 2 N-acetylserine.
Modified residue: 8 8 Phosphoserine.
Modified residue: 218 218 Cysteine methyl ester.
Protein Length
221 AA.
Protein Sequence
(Canonical)
MSDSEEESQD RQLKIVVLGD GASGKTSLTT CFAQETFGKQ YKQTIGLDFF LRRITLPGNL  60
NVTLQIWDIG GQTIGGKMLD KYIYGAQGVL LVYDITNYQS FENLEDWYTV VKKVSEESET  120
QPLVALVGNK IDLEHMRTIK PEKHLRFCQE NGFSSHFVSA KTGDSVFLCF QKVAAEILGI  180
KLNKAEIEQS QRVVKADIVN YNQEPMSRTV NPPRSSMCAV Q                      221
FASTA
(Canonical)
>LipidDB-9606-01404|P51157
MSDSEEESQDRQLKIVVLGDGASGKTSLTTCFAQETFGKQYKQTIGLDFFLRRITLPGNL
NVTLQIWDIGGQTIGGKMLDKYIYGAQGVLLVYDITNYQSFENLEDWYTVVKKVSEESET
QPLVALVGNKIDLEHMRTIKPEKHLRFCQENGFSSHFVSAKTGDSVFLCFQKVAAEILGI
KLNKAEIEQSQRVVKADIVNYNQEPMSRTVNPPRSSMCAVQ
Gene Ontology
GO:0036064; C:ciliary basal body; ISS:UniProtKB
GO:0035253; C:ciliary rootlet; ISS:UniProtKB
GO:0005737; C:cytoplasm; IEA:UniProtKB-KW
GO:0005886; C:plasma membrane; IEA:UniProtKB-KW
GO:0019003; F:GDP binding; IDA:UniProtKB
GO:0005525; F:GTP binding; IDA:UniProtKB
GO:0003924; F:GTPase activity; TAS:ProtInc
GO:0006184; P:GTP catabolic process; TAS:GOC
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro
Interpro
InterPro; IPR027417; P-loop_NTPase
InterPro; IPR005225; Small_GTP-bd_dom
InterPro; IPR001806; Small_GTPase
Pfam
Pfam; PF00071; Ras;
SMART
PROSITE
PROSITE; PS51419; RAB;
PRINTS
PRINTS; PR00449; RASTRNSFRMNG;