Lipid Modification Database
Tag Content
LipidDB ID
LipidDB-9606-00538
Entry Name
UniProt Accession
Theoretical PI
5.19
Molecular Weight
42447.74
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Protein phosphatase 1A
Protein Synonyms/Alias
3.1.3.16; Protein phosphatase 2C isoform alpha; PP2C-alpha; Protein phosphatase IA;
Gene Name
PPM1A
Gene Synonyms/Alias
PPPM1A;
Created Date
01-JUN-1994
 Lipid Modification Sites 
 Position   Sequence Form   Peptide   References   Modification Type 
2
Canonical
******MGAFLDKPK
[1]
N-Myristoylation
Organism
Homo sapiens (Human)
NCBI Taxa ID
9606
Reference
[1] Suzuki T, Moriya K, Nagatoshi K, Ota Y, Ezure T, Ando E, Tsunasawa S, UtsumiT. Strategy for comprehensive identification of human N-myristoylated proteinsusing an insect cell-free protein synthesis system. Proteomics. 2010May;10(9):1780-93. doi: 10.1002/pmic.200900783.[PMID:20213681]
Functional Description
Enzyme with a broad specificity. Negatively regulates TGF-beta signaling through dephosphorylating SMAD2 and SMAD3, resulting in their dissociation from SMAD4, nuclear export of the SMADs and termination of the TGF-beta-mediated signaling. Dephosphorylates PRKAA1 and PRKAA2. Plays an important role in the termination of TNF-alpha-mediated NF-kappa-B activation through dephosphorylating and inactivating IKBKB/IKKB.
Sequence Annotation
Metal binding site: 60 60 Manganese 1.
Metal binding site: 60 60 Manganese 2.
Metal binding site: 61 61 Manganese 1; via carbonyl oxygen.
Metal binding site: 239 239 Manganese 2.
Metal binding site: 282 282 Manganese 2.
Modified residue: 375 375 Phosphoserine.
Protein Length
382 AA.
Protein Sequence
(Canonical)
MGAFLDKPKM EKHNAQGQGN GLRYGLSSMQ GWRVEMEDAH TAVIGLPSGL ESWSFFAVYD  60
GHAGSQVAKY CCEHLLDHIT NNQDFKGSAG APSVENVKNG IRTGFLEIDE HMRVMSEKKH  120
GADRSGSTAV GVLISPQHTY FINCGDSRGL LCRNRKVHFF TQDHKPSNPL EKERIQNAGG  180
SVMIQRVNGS LAVSRALGDF DYKCVHGKGP TEQLVSPEPE VHDIERSEED DQFIILACDG  240
IWDVMGNEEL CDFVRSRLEV TDDLEKVCNE VVDTCLYKGS RDNMSVILIC FPNAPKVSPE  300
AVKKEAELDK YLECRVEEII KKQGEGVPDL VHVMRTLASE NIPSLPPGGE LASKRNVIEA  360
VYNRLNPYKN DDTDSTSTDD MW                                           382
FASTA
(Canonical)
>LipidDB-9606-00538|P35813
MGAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYD
GHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKH
GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG
SVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDG
IWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPKVSPE
AVKKEAELDKYLECRVEEIIKKQGEGVPDLVHVMRTLASENIPSLPPGGELASKRNVIEA
VYNRLNPYKNDDTDSTSTDDMW
Gene Ontology
GO:0005829; C:cytosol; ISS:UniProtKB
GO:0016020; C:membrane; ISS:UniProtKB
GO:0043005; C:neuron projection; IEA:Ensembl
GO:0005654; C:nucleoplasm; TAS:Reactome
GO:0005634; C:nucleus; IDA:UniProtKB
GO:0005891; C:voltage-gated calcium channel complex; IEA:Ensembl
GO:0033192; F:calmodulin-dependent protein phosphatase activity; IDA:UniProtKB
GO:0000287; F:magnesium ion binding; IEA:InterPro
GO:0030145; F:manganese ion binding; IEA:InterPro
GO:0004722; F:protein serine/threonine phosphatase activity; IDA:UniProtKB
GO:0070412; F:R-SMAD binding; IPI:UniProtKB
GO:0004871; F:signal transducer activity; IMP:UniProtKB
GO:0007050; P:cell cycle arrest; TAS:Reactome
GO:0016311; P:dephosphorylation; IDA:BHF-UCL
GO:0010467; P:gene expression; TAS:Reactome
GO:0008286; P:insulin receptor signaling pathway; TAS:Reactome
GO:0006499; P:N-terminal protein myristoylation; ISS:UniProtKB
GO:0043124; P:negative regulation of I-kappaB kinase/NF-kappaB signaling; IMP:UniProtKB
GO:0042347; P:negative regulation of NF-kappaB import into nucleus; IMP:UniProtKB
GO:0010991; P:negative regulation of SMAD protein complex assembly; IDA:UniProtKB
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; TAS:Reactome
GO:0030512; P:negative regulation of transforming growth factor beta receptor signaling pathway; IDA:UniProtKB
GO:0035970; P:peptidyl-threonine dephosphorylation; IDA:UniProtKB
GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; IMP:UniProtKB
GO:0045893; P:positive regulation of transcription, DNA-templated; IDA:BHF-UCL
GO:0030177; P:positive regulation of Wnt signaling pathway; IDA:BHF-UCL
GO:0006470; P:protein dephosphorylation; IMP:UniProtKB
GO:0006367; P:transcription initiation from RNA polymerase II promoter; TAS:Reactome
GO:0006351; P:transcription, DNA-templated; TAS:Reactome
GO:0007179; P:transforming growth factor beta receptor signaling pathway; TAS:Reactome
GO:0016055; P:Wnt signaling pathway; IDA:BHF-UCL
Interpro
InterPro; IPR001932; PP2C-like_dom
InterPro; IPR012911; PP2C_C
InterPro; IPR000222; PP2C_Mn2_Asp60_BS
InterPro; IPR015655; Protein_Pase_2C
Pfam
Pfam; PF00481; PP2C;
Pfam; PF07830; PP2C_C;
SMART
SMART; SM00331; PP2C_SIG;
SMART; SM00332; PP2Cc;
PROSITE
PROSITE; PS01032; PP2C;
PRINTS