Lipid Modification Database
Tag Content
LipidDB ID
LipidDB-7955-00099
Entry Name
UniProt Accession
Theoretical PI
5.76
Molecular Weight
98235.05
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Protein Synonyms/Alias
Uncharacterized protein;
Gene Name
prickle1b
Gene Synonyms/Alias
Created Date
21-DEC-2004
 Lipid Modification Sites 
 Position   Sequence Form   Peptide   References   Modification Type 
860
Canonical
KGHKGKNCIIS****
[1]
S-Farnesylation
Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
NCBI Taxa ID
7955
Reference
[1] Mapp OM, Walsh GS, Moens CB, Tada M, Prince VE. Zebrafish Prickle1b mediatesfacial branchiomotor neuron migration via a farnesylation-dependent nuclearactivity. Development. 2011 May;138(10):2121-32. doi: 10.1242/dev.060442.[PMID:21521740]
Functional Description
Sequence Annotation
Protein Length
863 AA.
Protein Sequence
(Canonical)
MSLETTSGIW PITRAPDMDS RGAKAFGFQR SSTSDDDSGC ALEEYTWVPP GLRAEQVQIY  60
FSCLPEEKVP YVNSPGEKHR IRQLLYQLPP HDNEIRYCQS LSDEERRELH MFSMQRKKEA  120
LGRGTPKLLP RALQHNCEHC KENINGGEMA VFASRAGPGP CWHPACFTCY TCHELLVDLI  180
YFYHNGNIHC GRHHAELLKP RCSACDEIIF ADECTEAEGR HWHMKHFSCF ECETILGGQR  240
YIMKDGRPFC CGCFESLYAE YCEACGENIG VDHAQMTYEG VHWHATDKCF CCAQCKTSLL  300
GCPFLPKDGR IYCSKDCSLG EDVQASDSSD SAFQSARSRE SRRSIRMGKS SRPTEQCQQT  360
KLYSATDYRT SSLCGDNTET MCHQLERINF TEDNYWRERD EQEAPEDSVE DWAEHEDYMT  420
QLLLKFGDRG VIHAEDSRAA EPWMVKDTET NRTKPEIKMS GHNLASKKHH TDMYWAQSQD  480
GLGDSAYGSH PGPASARKIQ ELEMDQGTVP GFWSEPRQWY EDSLECITSE LRKADHNIGD  540
SMDSLALSNI TGASVDGDSK DRQTIYSLQN MKDQEREIEE CDNISNVGTL NSSMLHRSAN  600
SLRSLNSELG HEETLGQGAR EDDEEDRIPP YFGAEPPSPL NLPVLRRTKS QSQPQSRSQQ  660
VKFSDDVLEK GYYGALGLRQ PPMSERTRRR TFHIEEEAAA AAERRPANRH HHKRRHSRKT  720
RSENALHLPS KNRGKLHVVP QVISSNMPEP RNGILLNHSA HSQHPYRQTT SDFPQQGMVR  780
LDQFQDFCDD DEEDDWCSTC SSSSSESEEE GFFLGQPIPK PRSQSFHYYT EDYPTRVTAL  840
TPPFGSRTKL KKKGHKGKNC IIS                                          863
FASTA
(Canonical)
>LipidDB-7955-00099|Q5SP54
MSLETTSGIWPITRAPDMDSRGAKAFGFQRSSTSDDDSGCALEEYTWVPPGLRAEQVQIY
FSCLPEEKVPYVNSPGEKHRIRQLLYQLPPHDNEIRYCQSLSDEERRELHMFSMQRKKEA
LGRGTPKLLPRALQHNCEHCKENINGGEMAVFASRAGPGPCWHPACFTCYTCHELLVDLI
YFYHNGNIHCGRHHAELLKPRCSACDEIIFADECTEAEGRHWHMKHFSCFECETILGGQR
YIMKDGRPFCCGCFESLYAEYCEACGENIGVDHAQMTYEGVHWHATDKCFCCAQCKTSLL
GCPFLPKDGRIYCSKDCSLGEDVQASDSSDSAFQSARSRESRRSIRMGKSSRPTEQCQQT
KLYSATDYRTSSLCGDNTETMCHQLERINFTEDNYWRERDEQEAPEDSVEDWAEHEDYMT
QLLLKFGDRGVIHAEDSRAAEPWMVKDTETNRTKPEIKMSGHNLASKKHHTDMYWAQSQD
GLGDSAYGSHPGPASARKIQELEMDQGTVPGFWSEPRQWYEDSLECITSELRKADHNIGD
SMDSLALSNITGASVDGDSKDRQTIYSLQNMKDQEREIEECDNISNVGTLNSSMLHRSAN
SLRSLNSELGHEETLGQGAREDDEEDRIPPYFGAEPPSPLNLPVLRRTKSQSQPQSRSQQ
VKFSDDVLEKGYYGALGLRQPPMSERTRRRTFHIEEEAAAAAERRPANRHHHKRRHSRKT
RSENALHLPSKNRGKLHVVPQVISSNMPEPRNGILLNHSAHSQHPYRQTTSDFPQQGMVR
LDQFQDFCDDDEEDDWCSTCSSSSSESEEEGFFLGQPIPKPRSQSFHYYTEDYPTRVTAL
TPPFGSRTKLKKKGHKGKNCIIS
Gene Ontology
GO:0008270; F:zinc ion binding; IEA:InterPro
Interpro
InterPro; IPR010442; PET_domain
InterPro; IPR001781; Znf_LIM
Pfam
Pfam; PF00412; LIM;
Pfam; PF06297; PET;
SMART
SMART; SM00132; LIM;
PROSITE
PROSITE; PS00478; LIM_DOMAIN_1;
PROSITE; PS50023; LIM_DOMAIN_2;
PROSITE; PS51303; PET;
PRINTS