Lipid Modification Database
Tag Content
LipidDB ID
LipidDB-284812-00181
Entry Name
UniProt Accession
Theoretical PI
5.71
Molecular Weight
22985.09
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
GTP-binding protein ypt5
Protein Synonyms/Alias
Gene Name
ypt5
Gene Synonyms/Alias
SPAC6F6.15;
Created Date
01-JUN-1994
 Lipid Modification Sites 
 Position   Sequence Form   Peptide   References   Modification Type 
209
Canonical
AAQPSGSCSC*****
[1]
S-Geranylgeranylation
211
Canonical
QPSGSCSC*******
[1]
S-Geranylgeranylation
Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
NCBI Taxa ID
284812
Reference
[1] Giannakouros T, Newman CM, Craighead MW, Armstrong J, Magee AI.Post-translational processing of Schizosaccharomyces pombe YPT5 protein. In vitroand in vivo analysis of processing mutants. J Biol Chem. 1993 Nov15;268(32):24467-74.[PMID:8226998]
Functional Description
Protein transport. Probably involved in vesicular traffic (By similarity).
Sequence Annotation
Nucleotide-binding: 21 28 GTP.
Nucleotide-binding: 70 74 GTP.
Nucleotide-binding: 128 131 GTP.
Motif: 43 51 Effector region.
Modified residue: 211 211 Cysteine methyl ester.
Protein Length
211 AA.
Protein Sequence
(Canonical)
MASNTAPKNV VTINQKLVLL GDSAVGKSSL VLRFVKDQFD DYRESTIGAA FLTQTLPIDE  60
NTSVKLEIWD TAGQERYKSL APMYYRNANC AIVVYDITQA ASLEKAKSWI KELQRQAPEG  120
IVIALAGNKL DLAQERRAVE KADAEAYAAE ANLLFFETSA KTAENVNELF TAIAKKLPLE  180
DKLNQARGAV NRGVNLSEAR PAAQPSGSCS C                                 211
FASTA
(Canonical)
>LipidDB-284812-00181|P36586
MASNTAPKNVVTINQKLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDE
NTSVKLEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEG
IVIALAGNKLDLAQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLE
DKLNQARGAVNRGVNLSEARPAAQPSGSCSC
Gene Ontology
GO:0005829; C:cytosol; IDA:PomBase
GO:0005770; C:late endosome; ISO:PomBase
GO:0005634; C:nucleus; IDA:PomBase
GO:0005886; C:plasma membrane; IEA:UniProtKB-KW
GO:0005525; F:GTP binding; IDA:PomBase
GO:0003924; F:GTPase activity; ISO:PomBase
GO:0006995; P:cellular response to nitrogen starvation; IMP:PomBase
GO:0006897; P:endocytosis; ISO:PomBase
GO:0070314; P:G1 to G0 transition; IMP:PomBase
GO:0006184; P:GTP catabolic process; ISO:GOC
GO:0015031; P:protein transport; IEA:UniProtKB-KW
GO:0033157; P:regulation of intracellular protein transport; IC:PomBase
GO:0007264; P:small GTPase mediated signal transduction; IEA:InterPro
Interpro
InterPro; IPR027417; P-loop_NTPase
InterPro; IPR005225; Small_GTP-bd_dom
InterPro; IPR001806; Small_GTPase
InterPro; IPR003579; Small_GTPase_Rab_type
Pfam
Pfam; PF00071; Ras;
SMART
SMART; SM00175; RAB;
PROSITE
PROSITE; PS51419; RAB;
PRINTS
PRINTS; PR00449; RASTRNSFRMNG;