Lipid Modification Database
Tag Content
LipidDB ID
LipidDB-11926-01020
Entry Name
UniProt Accession
Theoretical PI
8.46
Molecular Weight
47496.4
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Nucleocapsid protein p15-gag
Protein Synonyms/Alias
Pr53Gag; MA; CA; NC-gag;
Gene Name
gag
Gene Synonyms/Alias
Created Date
21-JUL-1986
 Lipid Modification Sites 
 Position   Sequence Form   Peptide   References   Modification Type 
2
Canonical
******MGQIFSRSA
[1]
N-Myristoylation
Organism
Human T-cell leukemia virus 1 (strain Japan ATK-1 subtype A) (HTLV-1)
NCBI Taxa ID
11926
Reference
[1] Hayakawa T, Miyazaki T, Misumi Y, Kobayashi M, Fujisawa Y.Myristoylation-dependent membrane targeting and release of the HTLV-I Gagprecursor, Pr53gag, in yeast. Gene. 1992 Oct 1;119(2):273-7.[PMID:1398108]
Functional Description
Matrix protein p19 targets Gag, Gag-Pro and Gag-Pro-Pol polyproteins to the plasma membrane via a multipartite membrane binding signal, that includes its myristoylated N-terminus. Also mediates nuclear localization of the preintegration complex (By similarity).
Sequence Annotation
Motif: 118 121 PPXY motif.
Motif: 124 127 PTAP/PSAP motif.
Functional site: 130 131 Cleavage; by viral protease.
Functional site: 344 345 Cleavage; by viral protease.
Modified residue: 105 105 Phosphoserine; by host MAPK1.
Protein Length
429 AA.
Protein Sequence
(Canonical)
MGQIFSRSAS PIPRPPRGLA AHHWLNFLQA AYRLEPGPSS YDFHQLKKFL KIALETPARI  60
CPINYSLLAS LLPKGYPGRV NEILHILIQT QAQIPSRPAP PPPSSPTHDP PDSDPQIPPP  120
YVEPTAPQVL PVMHPHGAPP NHRPWQMKDL QAIKQEVSQA APGSPQFMQT IRLAVQQFDP  180
TAKDLQDLLQ YLCSSLVASL HHQQLDSLIS EAETRGITGY NPLAGPLRVQ ANNPQQQGLR  240
REYQQLWLAA FAALPGSAKD PSWASILQGL EEPYHAFVER LNIALDNGLP EGTPKDPILR  300
SLAYSNANKE CQKLLQARGH TNSPLGDMLR ACQTWTPKDK TKVLVVQPKK PPPNQPCFRC  360
GKAGHWSRDC TQPRPPPGPC PLCQDPTHWK RDCPRLKPTI PEPEPEEDAL LLDLPADIPH  420
PKNSIGGEV                                                          429
FASTA
(Canonical)
>LipidDB-11926-01020|P03345
MGQIFSRSASPIPRPPRGLAAHHWLNFLQAAYRLEPGPSSYDFHQLKKFLKIALETPARI
CPINYSLLASLLPKGYPGRVNEILHILIQTQAQIPSRPAPPPPSSPTHDPPDSDPQIPPP
YVEPTAPQVLPVMHPHGAPPNHRPWQMKDLQAIKQEVSQAAPGSPQFMQTIRLAVQQFDP
TAKDLQDLLQYLCSSLVASLHHQQLDSLISEAETRGITGYNPLAGPLRVQANNPQQQGLR
REYQQLWLAAFAALPGSAKDPSWASILQGLEEPYHAFVERLNIALDNGLPEGTPKDPILR
SLAYSNANKECQKLLQARGHTNSPLGDMLRACQTWTPKDKTKVLVVQPKKPPPNQPCFRC
GKAGHWSRDCTQPRPPPGPCPLCQDPTHWKRDCPRLKPTIPEPEPEEDALLLDLPADIPH
PKNSIGGEV
Gene Ontology
GO:0019013; C:viral nucleocapsid; IEA:UniProtKB-KW
GO:0003676; F:nucleic acid binding; IEA:InterPro
GO:0005198; F:structural molecule activity; IEA:InterPro
GO:0008270; F:zinc ion binding; IEA:InterPro
GO:0016032; P:viral process; IEA:UniProtKB-KW
Interpro
InterPro; IPR003139; D_retro_matrix_N
InterPro; IPR000721; Gag_p24
InterPro; IPR008916; Retrov_capsid_C
InterPro; IPR008919; Retrov_capsid_N
InterPro; IPR010999; Retrovr_matrix_N
InterPro; IPR001878; Znf_CCHC
Pfam
Pfam; PF02228; Gag_p19;
Pfam; PF00607; Gag_p24;
Pfam; PF00098; zf-CCHC;
SMART
SMART; SM00343; ZnF_C2HC;
PROSITE
PROSITE; PS50158; ZF_CCHC;
PRINTS