Lipid Modification Database
Tag Content
LipidDB ID
LipidDB-10116-01033
Entry Name
UniProt Accession
Theoretical PI
8.34
Molecular Weight
95370.84
Genbank Protein ID
Genbank Nucleotide ID
Protein Name
Protein Synonyms/Alias
Protein Sema4d;
Gene Name
Sema4d
Gene Synonyms/Alias
Created Date
20-APR-2010
 Lipid Modification Sites 
 Position   Sequence Form   Peptide   References   Modification Type 
4
Canonical
****MKMCAPVRGLF
[1]
S-Palmitoylation
96
Canonical
SEDKKSKCAEKGKSK
[1]
S-Palmitoylation
552
Canonical
MSGDTSSCLDKSKES
[1]
S-Palmitoylation
754
Canonical
LCLFSYNCYKGYLPG
[1]
S-Palmitoylation
Organism
Rattus norvegicus (Rat)
NCBI Taxa ID
10116
Reference
[1] Predicted from GPS-Lipid
Functional Description
Sequence Annotation
Protein Length
861 AA.
Protein Sequence
(Canonical)
MKMCAPVRGL FLALVAVWRT AVAFAPVPRI TWEHGDVRRI LCEEEALVAA SGPTAGSPRD  60
DSEISAPTRS LNVFEPALTP PSQVYWKVSE DKKSKCAEKG KSKQTECLNY IRVLQPLSST  120
SLYVCGTNAF QPTCDHLNLT SFKFLGKSED GKGRCPFDPA HSYTSVMVGG ELYSGTSYNF  180
LGSEPIISRN SSHSPLRTEY AIPWLNEPSF VFADVIHKSP DGTEAEDDKV YFFFTEVSVE  240
YEFVFKLMIP RVARVCKGDQ GGLRTLQKKW TSFLKARLIC SRPDSGLVFN ILQDVFVLRA  300
PGLKEPVFYA VFTPQLNNVG LSAVCAYTLS TVEAVFSRGK YMQSATVEQS HTKWVRYNGP  360
VPTPRPGACI DSEARAANYT SSLNLPDKTL QFVKDHPLMD DSVTPIDNRP KLIKKDVNYT  420
QIVVDRTQAL DGTFYDVMFL STDRGALHKA VILAKEVHVV EETQLFQDFE PVLSLLLSSK  480
KGRKFVYAGS NSGVVQAPLA FCGKHSSCED CVLARDPYCA WSPAIKACVT LHQAEGSSRG  540
WIQDMSGDTS SCLDKSKESF HQHFFKHGGT AELKCFQKSN LARVVWKFQN GELKAVSPKY  600
GFVGRKHLLI FNLSDGDSGV YQCLSEERVR NKTVSQLLAK HILEVKMVAR IPPSPTSQTA  660
QTEGSRITSK MPVASTQGSS PPTPALWATS PRAATLPPKS SSTGTSCEPK MVINTVPQLH  720
SEKTVYLKSS DNRLLMSLLL FLFVLFLCLF SYNCYKGYLP GQCLKFRSAL LLAKKKPKSE  780
FSDLEQSVKE TLVEPGSFSQ QNGDQPKPAL DTGYETEQDT ITSKVPTDRE DSQRIDELSA  840
RDKPFDVKCE LKFADSDADG D                                            861
FASTA
(Canonical)
>LipidDB-10116-01033|D3ZYR4
MKMCAPVRGLFLALVAVWRTAVAFAPVPRITWEHGDVRRILCEEEALVAASGPTAGSPRD
DSEISAPTRSLNVFEPALTPPSQVYWKVSEDKKSKCAEKGKSKQTECLNYIRVLQPLSST
SLYVCGTNAFQPTCDHLNLTSFKFLGKSEDGKGRCPFDPAHSYTSVMVGGELYSGTSYNF
LGSEPIISRNSSHSPLRTEYAIPWLNEPSFVFADVIHKSPDGTEAEDDKVYFFFTEVSVE
YEFVFKLMIPRVARVCKGDQGGLRTLQKKWTSFLKARLICSRPDSGLVFNILQDVFVLRA
PGLKEPVFYAVFTPQLNNVGLSAVCAYTLSTVEAVFSRGKYMQSATVEQSHTKWVRYNGP
VPTPRPGACIDSEARAANYTSSLNLPDKTLQFVKDHPLMDDSVTPIDNRPKLIKKDVNYT
QIVVDRTQALDGTFYDVMFLSTDRGALHKAVILAKEVHVVEETQLFQDFEPVLSLLLSSK
KGRKFVYAGSNSGVVQAPLAFCGKHSSCEDCVLARDPYCAWSPAIKACVTLHQAEGSSRG
WIQDMSGDTSSCLDKSKESFHQHFFKHGGTAELKCFQKSNLARVVWKFQNGELKAVSPKY
GFVGRKHLLIFNLSDGDSGVYQCLSEERVRNKTVSQLLAKHILEVKMVARIPPSPTSQTA
QTEGSRITSKMPVASTQGSSPPTPALWATSPRAATLPPKSSSTGTSCEPKMVINTVPQLH
SEKTVYLKSSDNRLLMSLLLFLFVLFLCLFSYNCYKGYLPGQCLKFRSALLLAKKKPKSE
FSDLEQSVKETLVEPGSFSQQNGDQPKPALDTGYETEQDTITSKVPTDREDSQRIDELSA
RDKPFDVKCELKFADSDADGD
Gene Ontology
GO:0005615; C:extracellular space; IEA:Ensembl
GO:0005887; C:integral component of plasma membrane; IEA:Ensembl
GO:0004888; F:transmembrane signaling receptor activity; IEA:Ensembl
GO:0070486; P:leukocyte aggregation; IEA:Ensembl
GO:0010693; P:negative regulation of alkaline phosphatase activity; IEA:Ensembl
GO:0007162; P:negative regulation of cell adhesion; IEA:Ensembl
GO:0045668; P:negative regulation of osteoblast differentiation; IEA:Ensembl
GO:0050732; P:negative regulation of peptidyl-tyrosine phosphorylation; IEA:Ensembl
GO:0000122; P:negative regulation of transcription from RNA polymerase II promoter; IEA:Ensembl
GO:0043931; P:ossification involved in bone maturation; IEA:Ensembl
GO:0030335; P:positive regulation of cell migration; IEA:Ensembl
GO:0048672; P:positive regulation of collateral sprouting; IEA:Ensembl
GO:0050731; P:positive regulation of peptidyl-tyrosine phosphorylation; IEA:Ensembl
GO:0014068; P:positive regulation of phosphatidylinositol 3-kinase signaling; IEA:Ensembl
GO:0032321; P:positive regulation of Rho GTPase activity; IEA:Ensembl
GO:0008360; P:regulation of cell shape; IEA:Ensembl
GO:0048814; P:regulation of dendrite morphogenesis; IEA:Ensembl
GO:1900220; P:semaphorin-plexin signaling pathway involved in bone trabecula morphogenesis; IEA:Ensembl
Interpro
InterPro; IPR007110; Ig-like_dom
InterPro; IPR013783; Ig-like_fold
InterPro; IPR003599; Ig_sub
InterPro; IPR016201; Plexin-like_fold
InterPro; IPR002165; Plexin_repeat
InterPro; IPR001627; Semap_dom
InterPro; IPR027231; Semaphorin
InterPro; IPR015943; WD40/YVTN_repeat-like_dom
Pfam
Pfam; PF01437; PSI;
Pfam; PF01403; Sema;
SMART
SMART; SM00409; IG;
SMART; SM00423; PSI;
SMART; SM00630; Sema;
PROSITE
PROSITE; PS50835; IG_LIKE;
PROSITE; PS51004; SEMA;
PRINTS