| Tag |
Content |
LipidDB ID |
LipidDB-10116-01013 |
Entry Name |
|
UniProt Accession |
|
Theoretical PI |
4.83 |
Molecular Weight |
110297.08 |
Genbank Protein ID |
|
Genbank Nucleotide ID |
|
Protein Name |
|
Protein Synonyms/Alias |
Protein Pcdh1; |
Gene Name |
Pcdh1 |
Gene Synonyms/Alias |
|
Created Date |
03-MAY-2011 |
| Lipid Modification Sites |
|---|
| Position |
Sequence Form |
Peptide |
References |
Modification Type |
834 | Canonical | LAVLVRYCRQREAKS | [1] | S-Palmitoylation |
|
Organism |
Rattus norvegicus (Rat) |
NCBI Taxa ID |
10116 |
Reference |
[1] Predicted from GPS-Lipid
|
Functional Description |
|
Sequence Annotation |
|
Protein Length |
1017 AA. |
Protein Sequence
(Canonical) |
LVVLLILEPA SSHTTQVVYK VPEEQPPNTL IGSLAADYGL PDVGHLYKLE VGAPYLRVDG 60
KTGDIFTTET SIDREGLREC QNQISGSPCI LEFEVSITDL VQNGSPRLLE GQIEVQDIND 120
NTPNFASPVI TLAIPENTNI GSLFPIPLAT DRDAGPNGVA SYELQAGPEA QELFGLQVAE 180
DQEEKQPQLI VMGNLDRERW DSYDLTIKVQ DGGSPPRASS ALLRVTVLDT NDNAPKFERP 240
TYEAELSENS PIGHSVIQVK ANDSDQGANA EIDYTFHQAP EVVRRLLRLD RNTGLITVQG 300
PVDREDLSTL RFSVLAKDRG ANPKSARAQV VVTVKDMNDN APTIEIRGIG LVTHQDGMAN 360
ISEDVAEETA VALVQVSDRD EGENAAVTCV VAGDVPFQLR QASETGSDSK KKYFLQTTTP 420
LDYEKVKDYT IEIVAVDSGN PPLSSTNSLR VQVVDVNDNA PVFTQSITEV AFPENNKPGE 480
VVAEVTASDA DSGSNAELVY SLEPEPAAQG LFTISPENGE VRVKTSLDRE QRDSYELKVV 540
AADRGSPSLQ GTATVLVNVL DCNDNDPKFM LSGYNFSVME NMPALSPVGM VTVIDGDKGE 600
NARVQLSVEQ DNGDFVIQNG TGTILSSLSF DREQQSTYTF QLKAVDGGVP PRSAYVGVTI 660
NVLDENDNAP FITAPSNTSH RLLTPQTRLG ETVSQVTAED IDSGINAELT YSIAGGNPYG 720
LFQIGSHSGA ITLEKEIERR HHGLHRLVVK VSDRGKPPRY GTALVHLYVN ETLANRTLLE 780
TLLVHSLDTP LDIDIAGDPE YERSKQRGNI LFGVVAGVVA VALLIALAVL VRYCRQREAK 840
SGYQAGKKET KDLYAPKPSG KAAKGSKSKG KKSKSPKPVK PVEDEDDTGL QKSLKFNLMS 900
DAPGDSPRIH LPLNYPPGSP DLGRHYRSNS PLPSIQLQPQ SPSASKKHQV VQDLPPANTF 960
VGTGDTTSTG SEQYSDYSYR TNPPKYPSKQ VGQPFRLSTP QPPPHPYHGA IWTEVWE 1017
|
FASTA
(Canonical) |
>LipidDB-10116-01013|F1M8K1
LVVLLILEPASSHTTQVVYKVPEEQPPNTLIGSLAADYGLPDVGHLYKLEVGAPYLRVDG
KTGDIFTTETSIDREGLRECQNQISGSPCILEFEVSITDLVQNGSPRLLEGQIEVQDIND
NTPNFASPVITLAIPENTNIGSLFPIPLATDRDAGPNGVASYELQAGPEAQELFGLQVAE
DQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERP
TYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQG
PVDREDLSTLRFSVLAKDRGANPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMAN
ISEDVAEETAVALVQVSDRDEGENAAVTCVVAGDVPFQLRQASETGSDSKKKYFLQTTTP
LDYEKVKDYTIEIVAVDSGNPPLSSTNSLRVQVVDVNDNAPVFTQSITEVAFPENNKPGE
VVAEVTASDADSGSNAELVYSLEPEPAAQGLFTISPENGEVRVKTSLDREQRDSYELKVV
AADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGE
NARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYTFQLKAVDGGVPPRSAYVGVTI
NVLDENDNAPFITAPSNTSHRLLTPQTRLGETVSQVTAEDIDSGINAELTYSIAGGNPYG
LFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLE
TLLVHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAK
SGYQAGKKETKDLYAPKPSGKAAKGSKSKGKKSKSPKPVKPVEDEDDTGLQKSLKFNLMS
DAPGDSPRIHLPLNYPPGSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTF
VGTGDTTSTGSEQYSDYSYRTNPPKYPSKQVGQPFRLSTPQPPPHPYHGAIWTEVWE
|
Gene Ontology |
GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW GO:0005886; C:plasma membrane; IEA:InterPro GO:0005509; F:calcium ion binding; IEA:InterPro GO:0007156; P:homophilic cell adhesion; IEA:InterPro |
Interpro |
|
Pfam |
|
SMART |
|
PROSITE |
|
PRINTS |
|